Coming back to my dev environment, I encountered the following warning after updating:
┌ Warning: Circular dependency detected. Precompilation will be skipped for:
│ Base.PkgId(Base.UUID("0d7ed370-da01-4f52-bd93-41d350b8b718"), "StaticArrayInterface")
│ Base.PkgId(Base.UUID("63c18a36-062a-441e-b654-da1e3ab1ce7c"), "KernelAbstractions")
│ Base.PkgId(Base.UUID("bdcacae8-1622-11e9-2a5c-532679323890"), "LoopVectorization")
│ Base.PkgId(Base.UUID("e8712464-036d-575c-85ac-952ae31322ab"), "ImageQuilting")
│ Base.PkgId(Base.UUID("3313a046-1c4e-5140-bd84-a090513b84eb"), "GeoStatsProcessesImageQuiltingExt")
│ Base.PkgId(Base.UUID("6a3955dd-da59-5b1f-98d4-e7296123deb5"), "ImageFiltering")
│ Base.PkgId(Base.UUID("aa102bde-5a27-4b0c-b2c1-e7a7dcc4c3e7"), "GeoStatsProcesses")
│ Base.PkgId(Base.UUID("d41bc354-129a-5804-8e4c-c37616107c6c"), "NLSolversBase")
│ Base.PkgId(Base.UUID("699899dd-2948-59d9-a4f6-ce210f3f1f61"), "FiniteDiffSparseArraysExt")
│ Base.PkgId(Base.UUID("7b69abe5-ce0e-594b-b972-04f3cfc2920c"), "GeoTablesTableTransformsExt")
│ Base.PkgId(Base.UUID("10f19ff3-798f-405d-979b-55457f8fc047"), "LayoutPointers")
│ Base.PkgId(Base.UUID("cd7822ce-9704-5052-ac77-ec670066593c"), "GeoStatsBaseMakieExt")
│ Base.PkgId(Base.UUID("7cd16168-b42c-5e7d-a585-4f59d326662d"), "GeoStatsImages")
│ Base.PkgId(Base.UUID("135379e1-83be-5ae7-9e8e-29dade3dc6c7"), "StratiGraphics")
│ Base.PkgId(Base.UUID("6a86dc24-6348-571c-b903-95158fe2bd41"), "FiniteDiff")
│ Base.PkgId(Base.UUID("499d2952-c3ce-5339-96ee-b197ee6daaa6"), "SpecialFunctionsExt")
│ Base.PkgId(Base.UUID("eae2faf6-b232-58cb-a410-7764fda2830c"), "ChainRulesCoreExt")
│ Base.PkgId(Base.UUID("e5d66e97-8c70-46bb-8b66-04a2d73ad782"), "TableDistances")
│ Base.PkgId(Base.UUID("a8fab69c-de6f-5f74-aba3-bef19c2d033f"), "StaticArrayInterfaceOffsetArraysExt")
│ Base.PkgId(Base.UUID("e044c2ac-1594-5fb4-97e0-e617dbc85f6c"), "OptimMOIExt")
│ Base.PkgId(Base.UUID("75e56524-3a34-51de-85ea-03aa6eac4b64"), "FiniteDiffStaticArraysExt")
│ Base.PkgId(Base.UUID("1285c0f1-ff9f-5867-b66e-0f359bcf09ba"), "SpecialFunctionsExt")
│ Base.PkgId(Base.UUID("49a56592-68de-5a47-8564-38ad2cf94f85"), "GeoStatsProcessesStratiGraphicsExt")
│ Base.PkgId(Base.UUID("06e1c1a7-607b-532d-9fad-de7d9aa2abac"), "TiledIteration")
│ Base.PkgId(Base.UUID("c33e195c-a261-58f8-a269-eb58d4181ba2"), "ImageQuiltingMakieExt")
│ Base.PkgId(Base.UUID("725d9659-360f-4996-9c94-5f19c7e4a8a6"), "GeoStatsTransforms")
│ Base.PkgId(Base.UUID("323cb8eb-fbf6-51c0-afd0-f8fba70507b2"), "GeoStatsBase")
│ Base.PkgId(Base.UUID("6771c435-bc22-4842-b0c3-41852a255103"), "GeoStatsFunctions")
│ Base.PkgId(Base.UUID("052768ef-5323-5732-b1bb-66c8b64840ba"), "CUDA")
│ Base.PkgId(Base.UUID("85068d23-b5fb-53f1-8204-05c2aba6942f"), "SparseArraysExt")
│ Base.PkgId(Base.UUID("13011619-4c7c-5ef0-948f-5fc81565cd05"), "AtomixCUDAExt")
│ Base.PkgId(Base.UUID("f7f64f91-2ceb-57d6-8516-8ba376f72ced"), "DataScienceTraitsMeshesExt")
│ Base.PkgId(Base.UUID("06b0261c-7a9b-5753-9bdf-fd6840237b4a"), "StaticArrayInterfaceStaticArraysExt")
│ Base.PkgId(Base.UUID("c146b59d-1589-421c-8e09-a22e554fd05c"), "StatsLearnModels")
│ Base.PkgId(Base.UUID("f5a160d5-e41d-4189-8b61-d57781c419e3"), "GeoIO")
│ Base.PkgId(Base.UUID("dcc97b0b-8ce5-5539-9008-bb190f959ef6"), "GeoStats")
│ Base.PkgId(Base.UUID("9d36f3b5-8124-4f7e-bcda-df733105c718"), "DrillHoles")
│ Base.PkgId(Base.UUID("ad987403-13c5-47b5-afee-0a48f6ac4f12"), "GeoStatsModels")
│ Base.PkgId(Base.UUID("90885c9c-b3fa-5344-a739-4d3f64e0b302"), "DensityRatioEstimationOptimExt")
│ Base.PkgId(Base.UUID("eacbb407-ea5a-433e-ab97-5258b1ca43fa"), "Meshes")
│ Base.PkgId(Base.UUID("66d79d19-2cc4-5b0b-ac7a-b340256d1ecd"), "LinearAlgebraExt")
│ Base.PkgId(Base.UUID("e502b557-6362-48c1-8219-d30d308dcdb0"), "GeoTables")
│ Base.PkgId(Base.UUID("0d432bfd-3ee1-4ac1-886a-39f05cc69a3e"), "TableTransforms")
│ Base.PkgId(Base.UUID("d3d80556-e9d4-5f37-9878-2ab0fcc64255"), "LineSearches")
│ Base.PkgId(Base.UUID("a9b04ea9-04f7-5d13-8c2e-9a13f647e8cf"), "GeoTablesMakieExt")
│ Base.PkgId(Base.UUID("4b8ca102-9d0f-5df8-84ed-253e0f005ba7"), "ForwardDiffExt")
│ Base.PkgId(Base.UUID("e88b219a-01c6-5919-9285-8c4e188332f1"), "GeoStatsFunctionsMakieExt")
│ Base.PkgId(Base.UUID("f78586ac-ba87-5ec7-b3a5-84bc1b258ee3"), "ArrayInterfaceCUDAExt")
│ Base.PkgId(Base.UUID("476501e8-09a2-5ece-8869-fb82de89a1fa"), "SLEEFPirates")
│ Base.PkgId(Base.UUID("429524aa-4258-5aef-a3af-852621145aeb"), "Optim")
│ Base.PkgId(Base.UUID("b25a72c3-76b7-5387-bf7c-7c85c3f44937"), "GeoStatsProcessesTuringPatternsExt")
│ Base.PkgId(Base.UUID("fb6a15b2-703c-40df-9091-08a04967cfa9"), "CloseOpenIntervals")
│ Base.PkgId(Base.UUID("3d5dd08c-fd9d-11e8-17fa-ed2836048c2f"), "VectorizationBase")
│ Base.PkgId(Base.UUID("787d08f9-d448-5407-9aad-5290dd7ab264"), "ImageMorphology")
│ Base.PkgId(Base.UUID("36f43c0d-3673-45fc-9557-6860e708e7aa"), "GeoStatsValidation")
│ Base.PkgId(Base.UUID("4610876b-9b01-57c8-9ad9-06315f1a66a5"), "GslibIO")
│ Base.PkgId(Base.UUID("fd73dc56-13e7-52f5-a3bb-9f1608bf6b57"), "MeshesMakieExt")
│ Base.PkgId(Base.UUID("2a3f1dca-97a5-4513-bfd8-b69f0106a87e"), "GeoArtifacts")
└ @ Base.Precompilation precompilation.jl:511
[ Info: Precompiling OhMyREPL [5fb14364-9ced-5910-84b2-373655c76a03] (cache misses: invalid header (4))
How to pin point the circular dependency? The message isn't very helpful.
Julia version?
Julia Version 1.11.1
Commit 8f5b7ca12ad (2024-10-16 10:53 UTC)
Build Info:
Official https://julialang.org/ release
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: 8 × Intel(R) Core(TM) i7-9700 CPU @ 3.00GHz
WORD_SIZE: 64
LLVM: libLLVM-16.0.6 (ORCJIT, skylake)
Threads: 8 default, 0 interactive, 4 GC (on 8 virtual cores)
Environment:
JULIA_EDITOR = code
JULIA_NUM_THREADS = 8
Trying to update to the latest stable now...
The problem is gone after updating to the latest stable:
Julia Version 1.11.2
Commit 5e9a32e7af2 (2024-12-01 20:02 UTC)
Build Info:
Official https://julialang.org/ release
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: 8 × Intel(R) Core(TM) i7-9700 CPU @ 3.00GHz
WORD_SIZE: 64
LLVM: libLLVM-16.0.6 (ORCJIT, skylake)
Threads: 8 default, 0 interactive, 4 GC (on 8 virtual cores)
Environment:
JULIA_EDITOR = code
JULIA_NUM_THREADS = 8
Júlio Hoffimann has marked this topic as resolved.
Last updated: Jan 29 2025 at 04:38 UTC